Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848326.1_cds_XP_016510344.1_23190
CDS Infomation

[gene=LOC107827674] [db_xref=GeneID:107827674] [protein=serine carboxypeptidase II-3-like] [protein_id=XP_016510344.1] [location=complement(join(3393..3554,3758..3863,3983..4078,4202..4314,5428..5670,5769..6040,6147..6254,6547..6916))] [gbkey=CDS]
Sequence

ATGAAAATTTCCTCTGTTTTAAGTCTTTTTCTAATTTTGTGCTACCTAAGTGCCCAACAA
TGCCACGCAGGGGAAGCAGATAATCTACGGCAATTTCTCAAGGCTCGACGGGCAACGACT
AGGATTAACCGCGGCATAGCGGCTGCCGAGAAACAAATACGATCAGCGTCAAAATTCATA
GTGCCACAGGTAGGATCAAAGGAAAATGACAAGATCTCGGCATTACCAGGGCAACCAAGT
GGGGTTAATTTCGATCAGTATTCAGGATATGTGACTGTCGATGCTAATGCTGGTAGAGCT
TTGTTCTATCACTTCACTGAATCAACTCAAGACCCTTCTACCAGGCCTCTTGTCTTGTGG
CTAAATGGAGGACCTGGTTGCTCTTCGTTTGGGAATGGAGGAATGACGGAACTTGGACCA
TTCCGTGTCAATAAAGATGGAAAAACCTTGTGGCTTAACCCATTTGCCTGGAACAATGTG
GCAAACGTCCTCTTTTTAGAATCACCTGCTGGTGTTGGATTCTCTTATTCTAATACTTCA
TCAGATTATGTTACTGGAGATGAAAAGACTAAACAAGACAGTTTTACCTTTCTCATTAAT
TGGATGGAAAGATTCCCAGAATATAAACGCCGCGATTTCTACATTATTGGAGAGAGTTAT
GCTGGGCACTATGTACCTCAACTTGCTCAGCTGATCTTATCCCACAAGAAATCAGAACCT
AACCTTGTTATTAACTTGCAAGGAATAGCTACAGGAAATGCCCTTCTCGATGATGAAGCA
ATGAATAGTGGTTCATACGACTTTTATTGGACACATGCACTAATATCAGATGAAGTCCAT
GAAGGAATTGTTTCTAATTGCAACTTCTCAGCAGAATTTACTACAGAAGCCTGTGATGAG
TACACAGACCAAGCAGATTCATCTCAAGGAAATATATACACTTATAACATATATTCCCAA
CTATGCAACTCCTCTGCCTATTTTTCCCTTCCTGAATCTGGATTTGATCCATGCTCAGCT
GATTACGTAGACAATTACTTAAACACCGTTGAAGTACAAAAGGCGCTTAATGTGAGAGAC
ATACCCCAGTCCTGGGGCTCTTGCAATGATGAAATACACGGCTCTTGGCAAGACTCCCCA
GATACTGTTCTACCTATCTTTCAAGAGCTCATGCAAAGTGGCATTAGGGTTTGGATTTAT
AGCGGAGACGTAGATCATATTTTGTCTGTAACGACCACTAGATATGCTATAAACAAAATC
AAAACACCAGTCAAAACGGCATGGTACCCTTGGTTCTTCCAAGGCGAGGTTGGTGGTTAT
GCAGTAGAATACCAGAACTTGACATTTGTGACGGTAAGAGGAGCAGGACATTTTGTTCCA
AGCTATCAACCTGGTCGTGCATTGACCATGTTCTCATCTTTTATCAATGGCACACTCCCT
CCCGGTCTCGACTTTCCTGGCCCCCACTAA

Peptide Sequence

PEP ID

XP_016510344.1
PEP Infomation

PREDICTED: serine carboxypeptidase II-3-like [Nicotiana tabacum]
Sequence

MKISSVLSLFLILCYLSAQQCHAGEADNLRQFLKARRATTRINRGIAAAEKQIRSASKFI
VPQVGSKENDKISALPGQPSGVNFDQYSGYVTVDANAGRALFYHFTESTQDPSTRPLVLW
LNGGPGCSSFGNGGMTELGPFRVNKDGKTLWLNPFAWNNVANVLFLESPAGVGFSYSNTS
SDYVTGDEKTKQDSFTFLINWMERFPEYKRRDFYIIGESYAGHYVPQLAQLILSHKKSEP
NLVINLQGIATGNALLDDEAMNSGSYDFYWTHALISDEVHEGIVSNCNFSAEFTTEACDE
YTDQADSSQGNIYTYNIYSQLCNSSAYFSLPESGFDPCSADYVDNYLNTVEVQKALNVRD
IPQSWGSCNDEIHGSWQDSPDTVLPIFQELMQSGIRVWIYSGDVDHILSVTTTRYAINKI
KTPVKTAWYPWFFQGEVGGYAVEYQNLTFVTVRGAGHFVPSYQPGRALTMFSSFINGTLP
PGLDFPGPH

Transcript Sequence

Gene sequence data has not been registered.